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Broad Institute Inc picard markduplicates
Picard Markduplicates, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/markduplicates/picard+markduplicates/pmc10091502__qrac006_suppl_supplementary_file_s5-24-8-20
Average 90 stars, based on 1 article reviews
picard markduplicates - by Bioz Stars, 2026-10
90/100 stars

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Related Articles

Genome Wide:

Article Title: Mouse promoters are characterised by low occupancy and high turnover of RNA polymerase II.
Article Snippet: Duplicated reads were removed for genome-wide and bait-capture, but not for amplicon SMF data, using the tool MarkDuplicates from Picard (version 2.15.0) (Broad Institute, 2019). .. Duplicated reads were removed for genome-wide and bait-capture, but not for amplicon SMF data, using the tool MarkDuplicates from Picard (version 2.15.0) (Broad Institute, 2019). ..

Amplification:

Article Title: Mouse promoters are characterised by low occupancy and high turnover of RNA polymerase II.
Article Snippet: Duplicated reads were removed for genome-wide and bait-capture, but not for amplicon SMF data, using the tool MarkDuplicates from Picard (version 2.15.0) (Broad Institute, 2019). .. Duplicated reads were removed for genome-wide and bait-capture, but not for amplicon SMF data, using the tool MarkDuplicates from Picard (version 2.15.0) (Broad Institute, 2019). ..

Imaging:

Article Title: De novo assembly of nuclear stress bodies rearranges and enhances NFIL3 to restrain acute inflammatory responses.
Article Snippet: Article De novo assembly of nuclear stress bodies rearranges and enhances NFIL3 to restrain acute inflammatory responses

other:


Article Title: Plio-Pleistocene Environmental Changes Drove the Settlement of Aotearoa New Zealand by Australian Open-Habitat Bird Lineages.
Article Snippet: Duplicates were removed using Picard v2.1.0 (Broad Institute 2019) MarkDuplicates.

Article Title: eIF3 engages with 3’-UTR termini of highly translated mRNAs
Article Snippet: Duplicate reads were removed with Picard (v2.21.9, https://broadinstitute. github.io/picard/; Broad Institute, 2020) MarkDuplicates, followed by peak calling with HOMER (v4.11) findPeaks and a FDR cutoff of 0.01 (Heinz et al., 2010).

Article Title: The pioneer transcription factor Zelda controls the exit from regeneration and restoration of patterning in Drosophila .
Article Snippet: LexAop- shRNA- zld generation To make a stable Drosophila line with RNAi- mediated knockdown of zld, the passenger strand previously described (15), specific to the zld transcript, was cloned into a LexAop- pWALIUM20 vector using services from GenScript (table S1).

Software:

Article Title:
Article Snippet: .. The tool MarkDuplicates of the software package Picard (v.1.119 available at http://picard.sourceforge.net) was applied to mark and remove the optical duplicates from the alignments. ..



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